rOpenSci HQ

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Software

CRAN dependencies

Use cases

Eight recent papers cite rOpenSci software:

References

  1. Cimiano, Philipp, and Ing Gerhard Sagerer. “Continuous quality control for research data to ensure reproducibility: an institutional approach.” http://doi.org/10.5281/zenodo.31298 

  2. Vandepitte, Leen, et al. “How Aphia—The Platform behind Several Online and Taxonomically Oriented Databases—Can Serve Both the Taxonomic Community and the Field of Biodiversity Informatics.” Journal of Marine Science and Engineering 3.4 (2015): 1448-1473. http://doi.org/10.3390/jmse3041448 

  3. Bevan, Andrew. “The data deluge.” Antiquity 89.348 (2015): 1473-1484. http://doi.org/10.15184/aqy.2015.102 

  4. Birch, Suzanne E. Pilaar, and Russell W. Graham. “A Stable Isotope Data Repository as Part of Neotoma, a Paleoecological Database.” BioScience (2015): biv133. http://doi.org/10.1093/biosci/biv133 

  5. Schaefer, Jacob, Nkrumah Frazier, and Jonathan Barr. “Dynamics of Near-Coastal Fish Assemblages following the Deepwater Horizon Oil Spill in the Northern Gulf of Mexico.” Transactions of the American Fisheries Society 145.1 (2015): 108-119. http://doi.org/10.1080/00028487.2015.1111253 

  6. Zizka, Alexander, and Alexandre Antonelli. “speciesgeocodeR: An R package for linking species occurrences, user-defined regions and phylogenetic trees for biogeography, ecology and evolution.” bioRxiv (2015): 032755. http://doi.org/10.1101/032755 

  7. Westcott, Sarah L., and Patrick D. Schloss. “De novo clustering methods outperform reference-based methods for assigning 16S rRNA gene sequences to operational taxonomic units.” PeerJ 3 (2015): e1487. http://doi.org/10.7717/peerj.1487